YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54635887|gb|E...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPFSGNDCL KPVTEGINRA FGAREPWQVA TITATTVLGG VWLWTFVCQD ESLYTRGRRQ  60
   61 FFRFAKKIPA VRRQVEAELT KANNDFESAI KESNAHLTYT VTLPEKGLSK EVILKLVDDH 120
  121 LKTGHYEWRD GRVSGAVYGY NPELVQLVTE VYGKASYTNP LHADLFPGVC KMEAEVVRMA 180
  181 CNLFHGSNDS CGTMTTGGTE SIVMAMKAYR DYAREYKGIT RPNIVVPRTA HAAFDKGGQY 240
  241 FNIHVRSVDV DPETFEVDMK KFKRAINRNT ILLVGSAPNF PYGTIDDIEA IAALGLKYDI 300
  301 PVHVDACLGS FVVALVRNAG YKLRPFDFDV KGVTSISADT HKYGFAPKGS SVILYSEKKF 360
  361 KDHQFTVTTD WPGGVYGSPT VNGSRAGGII AACWATMMSF GYDGYLEATK RIVDTARYIE 420
  421 RGVRDIDGLF VFGKPATSVI ALGSNVFDIF RLSDSLCKLG WNLNALQFPS GIHICVTDMH 480
  481 TQAGVADKFI ADVRSCTAEI MKDPGQPVVG KMALYGMAQS IPDRSVIGEV TRLFLHSMYY 540
  541 TPSQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle