YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54635849, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVTLKILVL VLAIGGGLIY MNVSQLWADL PAPKLDPQEW WGDEAQPKDY AAYLANSSEV  60
   61 IGNRLSYPEK TITDLFTRLN RTLRLTPPLE GVAFEYGFNT DYLKEVVEYW RDDYLPRWRE 120
  121 REVFLWQFNH FTTDIQGLRM HFLHLMVYDE NKVGKQHYPV LLLHGWPGSV REFYDLIHLL 180
  181 HQSNLDKNNK YIFDVIVPSL PGYGWSQGTS RKGLGPAQVA VIMSNLMARL GYDKYFIQGG 240
  241 DWGSIIGSHM ATLYPENVLG YHSNMCTSMS PKSHVMGALA GLWPSLFVPS GFEDLFFPKS 300
  301 RQLSYLIEES GYFHLQATKP DTVGAALTDN PVGLAAYILE KFSTWTNPSY RALADGGITK 360
  361 RYTMDALLDN VMIYYLTNSI TTSQRLYAEA YSKEQRGLLL ERVPTPVPTG CARFKSDIMH 420
  421 FLDIQLKDKF PNLIHSTYHK QGGHFAALEV PKVLHKDFLE FVKKVEQKFN VKPL

Type	Start	End	Confidence
Signal Peptide	1	28	0.81
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	474	0.98