YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125807882, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKFEYSLGL NELKSKELRL WQALIGEFLG TLILNFFACG ACTQVEDGTF KALAFGLSIF  60
   61 MAITIVGHLS GGHVNPAVTV GMLVAGRISF LRALFYIVFQ CLGAIAGTAA VRILIDRDYY 120
  121 NGLGHTSLAQ NITELQGLGI EFFLGLLLVL TVFGACDPHK PDSRYTAPLA IGMAVTLGHL 180
  181 GTIRYTGASM NPARTVGTAF ATDNWTSHWV YWAGPILGGV AAALIYTQVL EAKPVPKTAE 240
  241 AADKYRTHAD EREVRVRLIG AWSEDYFY

Type	Start	End	Confidence
Cytoplasmic	1	19	0.97
Transmembrane Helix	20	42	0.91
Non-Cytoplasmic	43	51	0.79
Transmembrane Helix	52	72	0.90
Cytoplasmic	73	92	0.79
Transmembrane Helix	93	115	0.92
Non-Cytoplasmic	116	134	0.95
Transmembrane Helix	135	156	0.91
Cytoplasmic	157	164	0.90
Transmembrane Helix	165	183	0.94
Non-Cytoplasmic	184	208	0.86
Transmembrane Helix	209	230	0.92
Cytoplasmic	231	268	0.99