YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54635706, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKDRALIIC SLSAILYSTI VGSAPAPADV DCSRRQDFNA VRGCCTIPTF HFKAFQKQCG  60
   61 RYMPESGPRV SPCLYDCIFN ATGVLTGSEV DAENARSMLK RLLGNNQDFV DVYLDGMLQC 120
  121 PGAVDAMLRS KRPRPMPGVE QCSPVPLYYG ICTTKHMFNY CPSSSWSDTE LCETARLQNL 180
  181 HC

Type	Start	End	Confidence
Signal Peptide	1	28	0.86
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	182	0.99