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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125807722, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYRLAPRASF PEIMQPRLSL NGLLNPSLMP SPRPLYRDHS SRSINPLTAY EQQMAELDGS  60
   61 FYASNAGYLG AGMGGSAGGA TTCTNLTVGG GSSGAPSGGL SHGGGTIGGG SAAIHTTELS 120
  121 ITPTMTADEQ FIDLGSLRRF SIDRQSFLDL GPKFGMSQPK FGQSVSQQGF FTSHDSLATP 180
  181 CASRASNSQM ATVSTASEMD LLHNKQRNKS RGRLKTTASG DQPLLGGTGT WNRSMGRGSQ 240
  241 DNTLAGGGAT SIPMGGHTQY GGNYCNGTDR YPRSRSQHQQ PHHNAAPAPH RYQLQHSISS 300
  301 ATHQRHSHGT SSQGGDGSGH HGGQSHQAHH GGGGCGAGSQ GGQPHHKKPH RTASQRIRAA 360
  361 TAARKLHFVF DPAGRLCYYW SMVVSMAFLY NFWVIIYRFA FQEINRRTIA IWFCLDYLSD 420
  421 FLYLIDIFFH FRTGYLEDGV LQTDALKLRT HYMNSTIFYI DCLCLLPLDF LYLSIGFNSI 480
  481 LRSFRLVKIY RFWAFMDRTE RHTNYPNLFR STALIHYLLV IFHWNGCLYH IIHKNNGFGS 540
  541 RNWVYHDSES ADVVKQYLQS YYWCTLALTT IGDLPKPRSK GEYVFVILQL LFGLMLFATV 600
  601 LGHVANIVTS VSAARKEFQA KLDGVKTYMR MRRVPNHLQV KVIKWFDYLW LTQKCSDEER 660
  661 AVSCLPDKLK ATINVHLDTL KRVEIFQNTE AGFLCELVLR LRPVLFSPGD YICRKGEVGK 720
  721 EMYIVNRGRL QVVADNGKTV MASLKAGSYF GEISILNMGT AGNRRTASVR SVGYSDLFVL 780
  781 SKKDMWDVLK EYPAARVRLE SIAVKRLEKY KKAPLEKVKY FNIVAMGRCQ STPGLVESCG 840
  841 RTSLEDMWLP PAPTPPAPLV HHPLTHQQHH QQHQPLHQHQ PQATQQSSQQ HGYSPRSYAD 900
  901 RLVRATDSPR SVSPSAHGSE ERPRSRAASH HSIRPQSQPS HTGHICDSSS QLECYGAGVG 960
  961 AVGGGTTPLL GSHEALEDEI KRLRERLHTV ESENQALNTK LSQQQWDLEN RLAEIEMQIC1020
 1021 GVSSTSSVDP ENETEELERN RE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle