YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54635579, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRVVSSPS LLNAWSQTLV RAMSTQGGSK NIGFVGLGNM GANMASNLIK AGHKLHVFDI  60
   61 SKSACDGLAA KGATVYAKTS ELAQNSDFVI TMLPNNAIVD KSYEEMTADG VNKDTIFIDS 120
  121 STIAPELVKT LQKRISAKGA RFIDAPVSGG VPGAEQATLT FMVGGTDAEY NAVKAVLECM 180
  181 GKRITHCGVY GMGQAAKLCN NMMLAISMIG VSEAMNLAVR QGLDAKVFAE IINSSTGRCW 240
  241 ASEIYNPVPG ICPTAPANKD YAGGFSSALI TKDLGLASGV ANSSNTPIPL GSLAHKIYTS 300
  301 LCTQGLGNKD FSVVYDQMKK EKFSV

Type	Start	End	Confidence
Signal Peptide	1	22	0.82
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	325	0.99