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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|195149487, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRTTNLDVA LPPTQDDLSR SKSNTLNSQR NGVGAGGTGT FGGAYSSGKS GPDKPTILQM  60
   61 ILEAFGLRNH TQNREPTSKD IGTLIMLGVM FLLFVISVTG FFVMWFTEFY NNTMLENLVL 120
  121 AENSDTAKSW LNPDPKYDTL LKAHIFHYPN IEDYLAGRAD KIQIRDMGPL VYQEHTVKDE 180
  181 VSFNKNFTVT FRDRKSYKFL PEKSAIREDD VLLVPNVPLI SAAGHVKRMP YATRLISGML 240
  241 INTFNEPLFK NLTAAEYLWG YEDKIIKLKS LGKGKRRFGL LMSRNGTSVD SIQVNTGEDD 300
  301 ITKYSTITQF NGMPQLDYWE GEECNRIDGV DPSMFSPNLL QTRDTVHVFL QVLCRKVPLN 360
  361 FEKEVTIYDD IDVLRYRTPM DVFDHPSENP ANQCYCHNTE RCLPSGVINA TKCYGDSPIF 420
  421 PSFPHFFSGD PVLYKIFDGI KPDAELHQTY ADIHPRFGFP ISGASRVQIN IMLDKTPLLK 480
  481 NQGDRLENGT ILPLMWIEIT SGDFSEEILH MLYVSTFYLD AIQQSLKYGT LLISVTSFSL 540
  541 IVAGVYYLNS KREEHLQESK SSAELEALNG GIVMVQHLNI PVSCGPSAPH IEVDDHRAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle