YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125807057, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAQVAILT VILLLETATA GVPLQRYEAL LKQQSAPTDE QLGLYDENDK VVQLSVGNFN  60
   61 ESVLEQNHGS LVEFYNTYCG HCRRFAPIYK QVAEQLHSWQ DVVIVGAIDC AAEENNGICR 120
  121 TYEVMGYPTL RYMGPGFQPS AKNYGQDLKS QDPAEIRGLL ASILVADNLT SSNNNTYWPN 180
  181 FHYVTENDSS STIFEGLSSQ REFVALVYEP ENSTVGIETA LFLLQWPSLQ VRRVSDLAAA 240
  241 SKFKIDPTSH QLSIVDRKGE ITPYTPAEQT GPAFSETIQT ALRKKNITPR PEKAEIQHAP 300
  301 VAAIGEKAEH NAILEEVHRH KHFVYQADLE QAIRTVLHNE VPKVNEIGGE RLLALQRFLG 360
  361 VLQRYNPLGF NGHQLLSKLK DYVVQFNQEL TGKQFEQELQ RLEGQLGPIY SSTHFVGCTG 420
  421 SSPHLRGFSC SLWTLFHFMT VQAAENEDSQ DPLEVLQAMH GYIKNFFGCS ECADHFQAMA 480
  481 SRRKIWSVPN KEEAVLWLWA AHNEVNQRLA GDDTEDPQFP KIQFPSEKSC SQCYRTPGST 540
  541 SDNIEINWNK DAVLSFLKNI NNPQFVSRYG VQQEDLLHAT AEKMRQKRQI SNVFSDIDMR 600
  601 MGMLLYAFCI VMMVVAFKLF AFKGYRKKPY GHDLLGKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle