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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125806852|ref...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRFQQLKK LWLLYLFLLF FAFFMFAISI NLYVASIQTA DSELRHPKPP PKRRSLWPHK  60
   61 SIVAHYIGKG DIFGNMTADD YNINQFKPVP GEGADGRPVV VPPRDRFRMQ RFFRLNSFNL 120
  121 LASDRIPLNR TLKDYRTPEC RDKKYDSGLP STSVIIVFHN EAWSVLLRTI TSVINRSPRH 180
  181 LLKEIILVDD ASERSYLKRQ LESYIRVLTV PTRIYRMKKR SGLVPARLLG AEHARGDVLT 240
  241 FLDAHCECSR GWLEPLLARI KEARNVVICP VIDIISDDNF SYTKTFENHW GGFNWQLSFR 300
  301 WFSSERKRQT TEITAKDSTA PIATPGMAGG LFAIDRNYFY EMGSYDSNMR VWGGENVEMS 360
  361 FRIWQCGGRV EISPCSHVGH VFRSSTPYTF PGGMSEVLTD NLARAATVWM DDWQYFVMLY 420
  421 TSGLSLSVKD KVNVTERVAL REKLQCKSFA WYLENIWPEH FFPAPDRFFG KIIWLDGETE 480
  481 CAQAYSKHMK NLPGRALSRE WKRAFEEIES KSEEFMSLID LERDKCLRPL KEVAPRSSLQ 540
  541 PVTVGDCTSH AQTMDMFVIT PKGQIMTNDN ICLAYRPPKQ GVIKLLKNRN ATTSNVMLTQ 600
  601 CAGDASQLWN YDMDTQQISH RDTKLCLTLK AATNARLQKQ EKVVLCMQCD FKDITQKWGF 660
  661 IPLPWRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle