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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54635326, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQFLASWLP HTGASSVGVL QLQFQFALRR DAARFIERPC ERPKELLEVD VDVDVNGDGR  60
   61 RLSLLKLGCE GPRAKNLCFL WENKQANKRQ SQLRTTASTS TKRAGQHRCK LELSSVTLCN 120
  121 LGVGATFGET ILHDLPRDST VVTKTTCELL RVEQQDFRLI WEKNKELMND IFTNCKLKNG 180
  181 FGPSVQQTAA APSPTKRPLS PDHPNPALPI TETPSPAMSR MGWALRTLLV ADNSSCLKDR 240
  241 KVSGKLIRKC APGTELVDWL VNLAPIVHTR AQAAGMWQAL VEEGVLTHVN KEQPFKDKCF 300
  301 LYRFRLDEEG GAPAVGIPQA EDQHAANEHI REALSALFQR GPDATLRMIL RKPSHERTSE 360
  361 ELELVFEELV HIAALSHLST SIKRELSSIF VFEAHAQAGT ICDEGRSWYI LLKGSVDVVI 420
  421 HGKGTVATLK TGDDFGKLAL INDAPRAATI VLKENNCHLL RVDKEHFNRI LRDVEANTLR 480
  481 LQEHGKDVLV LERVAKQRGQ HSAFKYTVMS GTPAKMLEHL LETRLGQSVG GMDPFLDDFL 540
  541 LTHIVFMPVV QLDAQTPEDR EYIVNFKKRV IQFMQKWVMA VRHAAFEEPS VCDFIEDLAA 600
  601 EVEADPDLNE ETSIVHNVLT QMARYQEDRN QNAGQKWKLP PNGQPICLFS GNATPSKTVI 660
  661 RPDDDIIFRV YCADHTYCTL RFPMHTTAEL IKACAADKLQ LNRGPEDLCL VEVRSNGERS 720
  721 VFKDNDVSIP TGLSLNGRLF VSVKDHLDAL TQLQEQECPT EGVDIDLEIL STKELAYHIT 780
  781 LFEWDLFYAV HEYELLYHTF GRHHFGKITA NLDVFLRRFN EVQYWIVTEL VSTPSLSKRV 840
  841 GLVRKFIKLA AYCKEYQNLN AFFAVVMGLS NMAVSRLQQT WEKIPSKFRK IFQEFEALID 900
  901 PSRNHRAYRV FVGKLQPPLI PFMPLLLKDM TFAHEGNKTS LDGLVNFEKM HMMAQTMRTI 960
  961 RFCRSRSLGL EPPSPKSEGE VRSYISSFRV IDNQRVLTAM SQKVEPTRKL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle