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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54635308, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKYQTTNSD AFALPAYPLI PSGDIRDQRK SQSNKQREPF VFFIMRLNLK AVMLVLTVAV  60
   61 VVITLGVYMR CAAFSFSPDF VRQFNRHHES QTSSAAQTSD ALQDIECSIN QEYSVHCKRD 120
  121 ENANEVYVPF SFLRNYFDVS GAVTTSGTEV AKFNWMHSTA KVNLPKGKYD ARGVFMYFEN 180
  181 YNVEVRDRVK CISAAEGVPV STQWEKRGYF YPTQIAQFAL SHYSKNLTEQ APRVHVLEDG 240
  241 DGYQMDWTTP KTSNMTRIWH HKFNTSVVQF ETAIGYESAI SIGLNQTLDL LLSVDMLLVT 300
  301 NSSSLMVTVQ NRDTKHSYNL HYIPADLLLS VQDSNIYYGL GASALNKWRH ITRDLHIDVQ 360
  361 KGIVLGDKRS PLKVRRSDLE VLSVAFLGIG FYDNITLSTS EHMAHFYDAA EWFVHNQDPK 420
  421 SGGWTNPVRR SLNGFAELSP GWISAMGQGH AISVLARAYW HSGGDERYLK AAAAGLQPYR 480
  481 VFSQDGGVLS QFMDKFYWYE EYPTTPPSLV LNGFIYSLLG LYDLNSTAPA KIAREAGQLF 540
  541 AQGMYSLKKM LLLYDTGSGT SYDLRHLSLG VAPNLARWDY HATHVNQLLL LATIDSDPLI 600
  601 AQTAERWKGY MFGKRAKHN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle