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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54635249, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIAGCASGTA LVTLDAALVE AADGGTEPER GNWSGRFDFL LSLLGYSVGL GNVWRFPYLC  60
   61 YNNGGGAFLI PFTIMLVIAG LPLMFMELSF GQYAALGPVA VYRRFCPLFR GLGTGMILVS 120
  121 AIVMLYYNLI IAWTIFYMFA SLGTTLPWQN CEPAWSTKHC FSYVQADQCE ATNGTYYLRT 180
  181 CYNSTVAEEN NITTLALHAL KRPPAEEYFN NFVLGLSSGI EETGSIKPSL AGCLFMAWVI 240
  241 VFLCLCKGVQ SSGKVVYFTA LFPYVVLVIL FVRGVTLPGA STGILFYLTP DWKQLANAQV 300
  301 WGDAAVQIFF ALSPSWGGLI TLSSYNKFSN NCYKGIFNPA RDSMIVAFCN IATSFFAGLV 360
  361 IFSIIGFLAH ELDVDVGKVV DQGAGLAFIV YPEVVTRLPI SPVWSVLFFV MLLTLGLDSQ 420
  421 FALMETVTTA ILDKFPNLRH SKIWVVLSVA IFGYIGGLGF TTNSGMYWLQ LMDKYAANWS 480
  481 VLLIAISECI LISWVYGSQR FLNDIQGMIG KRSWLWNTFW GIMWRYITPA TLLFILFFNW 540
  541 VEYKPAKYGH YVYPLWADTV GWIIGLLPVF IVFLVGFQQI WKAPKHLSFL ERIKFLLKPT 600
  601 AEWGPAGRPC VNLHAERYQT QNYDGVTNAQ ILVHGGPSDV LAYEDAEATA NGKRVKASSS 660
  661 TVVTVDVDVD VLPLATVGKL PGPSILKSSA KYCSIQQAVD DNGKHRGQTQ TSSSKKPLIV 720
  721 TDTEKKKNNQ KGEQNLASTT KVLSTGTMSS GRECITMSTF AGAGEKDSKK VNQPTLGAVG 780
  781 SVKASITSGG PPLKPMASTV ASRTSPPGNV CAAVLQVRAS PTAAIYCEED GARIKTTSSV 840
  841 AVGAFSVSGR TQSTLGTTEI AKLKTTKTTP AGSGTKPTAS LTASKPNTTA SSTVNVSAAS 900
  901 TTTVNAKINA NAASNDQKTQ AAGITVTTIT ETAVCVANER AEPSPISAKG MPISVISTTT 960
  961 TLASTAAASS KPQTVRAIPA CSIPGATTPA TFAAPKATVA ATPTESNPAV KAPAKSTATK1020
 1021 GLSSKPTAGA TTATPKTAPP SSSVTAKLPA GSETDPRELS SVKQSNIALK TTCSPAASDI1080
 1081 APQAKNKVKT TKPGTAKPMA TSPTKSTVKP IKPVSTSPTK TIRGKAITSP GTSANTGASV1140
 1141 GTVGKTGAST SKTTSSGKAK ANLSASTR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle