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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238879227
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRNILGLS KQLNRQTLLF SKTCQKSLIR PTVISAIQPH RQFSASLFAS DRKQANQSDK  60
   61 QPKLHSKEQS EDKPKHETEL IPTKEQLLAK ANNMYSRLKI RLKWLLKKSN RPFNTDDYSA 120
  121 FFSWLVVGNV FLFFVATTTF VSIVIFTANT VFAQEFVARK LGEFITKNSN LTVTFENAIV 180
  181 PGWSDGKISF RKCFVSRRPK RVEKFIKGSQ QEAYEESLQN EGTNEDEEDI FEDDGNYTQF 240
  241 DLTIEEVNIS LSLNKWVNGT GMIETLELKG MRGVVDRTHV HWKPDDDATN YKNIHQPGDF 300
  301 EFESFRMEDV LFTLMQPNGF RKFNVAIYNC ELSKLRKHWL FYDFLNANVM SGAYDNSLFT 360
  361 IHKKQRLNDF DEYTPTNSNL QKWKRVTRMR VDSLNIDHLN TGLEGPFGWI TSGRVDMIGD 420
  421 VMVPQENNEI NVSELVGMIT DAIKKEASRY KNPEVQEKHP NMRTRLTADD YHDISKYFVL 480
  481 DLTLRLNNVR AKVPFKSPEL SYINYALIRP IVAYINSKNT FIEIHNRIVK NLQDFSGSWT 540
  541 IYDSLLMDDI SEEVYDNFAE YVADEEARLI RLKRIGFWSL QLLVQLVLFG VGAVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle