YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19309401, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANALSSLCP QRVRELLSAI SPLISWKALA LLLAIINLKN MPLVWHDPYF PKGTPLVTHS  60
   61 GKPTHPVFVS YGISSRAPIL ETDYNQHKSN STYFSDLDVA RTALLLEASQ RDGTKPPKRK 120
  121 GIYVALGSVY CSFKREIKPF ELYEMETKVI AWDQKWMYVM TFFFRPASRK GGEKTLFATA 180
  181 LSKYVVKKGR LTVPPERVLR ASGFLPPRPE GSVAPEVTTS AEASGMGTPV NGEGLTASAS 240
  241 GVDGSLVREV LKLREEDMPE PKSLEAEKRS NSASWDSNEW TWERIEQERL RGLKVIEGYS 300
  301 TMDAKLYEEW QR

Type	Start	End	Confidence
Signal Peptide	1	30	0.59
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	312	0.97