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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13938659
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLANKKIDN QVKTFITYNK GRDWRLLQAP DADLRGDPVH CLLPYCSLHL HLKVSENPYT  60
   61 SGIIASRDTA PSIIVASGNI GSELSDSDIS MFVSSDAGNT WRQIFEEEHS ILYLDQGGVL 120
  121 VAMKHTSLPI RHLWLSFDEG RSWSKYSFTS IPLFVDGVLG EPGEETLIMT VFGHFSHRSE 180
  181 WQLVKVDYKS IFDRRCAEED YRPWQLHSQG EACIMGAKRI YKKRKSERKC MQGKYAGAME 240
  241 SEPCVCTEAD FDCDYGYERH SNGQCLPAFW FNPSSLSKDC SLGQSYLNST GYRKVVSNNC 300
  301 TDGVREQYTA KPQKCPGKAP RGLRIVTADG KLTAEQGHNV TLMVQLEEGD VQRTLIQVDF 360
  361 GDGIAVSYVN LSSMEDGIKH VYQNVGIFRV TVQVDNSLGS DSAVLYLHVT CPLEHVHLSL 420
  421 PFVTTKNKEV NATAVLWPSQ VGTLTYVWWY GNNTEPLITL EGSISFKFTS EGMNTITVQV 480
  481 SAGNAILQDT KTIAVYEEFR SLRLAFSPNL DDYNPDIPEW RRDISRVIKK SLVEATGIPS 540
  541 QHILVAVLPG LPTAAELFVL PYQDGTRENK RSSEDLEQIS EVLIHKLNQN LVHFELKPGV 600
  601 QVLVHAAHLT AAPLVDLTPT HSGSAMLMLL SVVFVGLAVF VIYKFKRKIP GINVYAQMQN 660
  661 EKEQELINPV SHSESRSSVP HPDLRRPGQL VDEKVESQLL GE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle