YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1945333
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSFFNHSSSI DHDSLPTKIV AGSSVSSFFC FLLEDSSSSS SSASSDLRFL SLDSSFSLSL  60
   61 SEDEDEDESE LEDSFDSSFL VSSFSSSSSS SEEESEEEEE ESLDSSFLVS ASLSLSEDDE 120
  121 EEDSESEDED EDEDSDSDSD SDSDSDEDED EDEDSEEEEE TALAFSSLAC LEALTSFLLP 180
  181 FTLVVLAILF YPAWVE

Type	Start	End	Confidence
Cytoplasmic	1	172	0.77
Transmembrane Helix	173	194	0.89
Non-Cytoplasmic	195	196	0.69