YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1945325
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYISSILSD DRPVICVGCL MDCSLKSFFS WILLCLVSSS SSENSSSSMK SSNSSKIPPL  60
   61 SAVLFLFSWS SSSRPYSLFL PLRKPDSSSS SSSEKKSSNL DVESCLDAAT LSLSDSAAFP 120
  121 SSPTLFNLLN FPEEELALVR STPAFSINKS KSSSDSRSSS SLSL

Type	Start	End	Confidence
Cytoplasmic	1	13	0.52
Transmembrane Helix	14	35	0.42
Non-Cytoplasmic	36	164	0.80