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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRM10_MILFA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLDFSQLN NEAKKLIAVH VPEAANMDQS FTYDEPNQLA GSSRNSTAPL INPDNAQEAD  60
   61 DDHKHTDDED QGKHGFYAPN LDYIIRGNDD PEDQHLLLDE SGEDGYIAPP KQVHAGVLSS 120
  121 LLKLYQNPQD EKSSASLSSR APSDGKTLAE EQEFGTDMPY HMPTSSLDFT KLKSGPQKLV 180
  181 NKFTHRSNKP QPGKEAEADD EDEDEENPDQ AYEKANLPSF QNARPKAPKK TIDPVNVSSK 240
  241 FHKKMKRKKI QQQKLRITVH ISDILQRQRF IMMICKALML YGAPTHRLEE YMTMTSRVLE 300
  301 IDGQFVYFPG CMIVSFGDAA TRTSEVHIVR CNQGVNLSKL SDTHTIYKAV IHDLISVDEA 360
  361 SQQLETLVRK KNQYSPWLSV FLYGFGSAMV CPFAFGGGWL DIPVTFGVGL CVGYLQFFVS 420
  421 SMSNLYSSVF EITASIVVSF IARGIGSINN SKTFCFSAIA QGSLALILPG YIILCGSLEL 480
  481 QSRNIVAGLF VCSMLLSIRY FWVSGITLGA ALFGWVYKNS TSDKKCRTSH NVNDKYRILF 540
  541 VPMFTICLGL INQARWRQLP VMMVISCTGY VGTYFAGKHF LNVPEFTAAI GAFIVGILGN 600
  601 VYSRVWKGMA VSAMLPAIFV QVPSGIASQS SLLSGIQSAD QITHSNSSLD SSSSDSSSSL 660
  661 SFGSTMVEVS IGISVGLFAA ALVVYPFGKR RTGLFTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle