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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14530067
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQPSPPAP SGDVAPPGAV QQPSETVSRI TDDNGAPSTA KEKAESSDIT CASSEKDIDR  60
   61 DRKDIDQESE LKITALARNL SRLSQKSGAV DGTNTFLDSS SDPELDPNSG QFNARKWTKN 120
  121 FLSVANRDPD RYPRRTAGVS FRNLSAFGYG TAADYQMDVA NMWLKGFGWI RRKLGFVDRV 180
  181 RIDILRDFEG FVRSGEMLVV LGRPGSGCST FLKTIAGETH GLWLDDGTDI QYQGISWDEM 240
  241 HSRFRGEVIY QAETEIHFPN LTAGETLLFA AQARTPANRF PGVTRDQYAH HMRDVTMAML 300
  301 GLSHTMNTLI GNEFIRGVSG GERKRVSIAE TILCGCPLQC WDNSTRGLDS STALEFVRNL 360
  361 RLSTEYTGST AIVAIYQASQ AIYDVFDKAI VLYEGRQIYF GSASDARRFF VEMGFECPDR 420
  421 QTTGDFLTSL TSPTERLVRK GFENLVPRTP DEFAERWKQS AERKRLLEEI EAFQNEHPLG 480
  481 GSKYEEFTRS RAAEKAKGTR AASPYTLSYP MQIRLCLSRG FLRLKGDMSM TLATTIGNSI 540
  541 MALIISSIFY NMNGTTEKFF SRGALLFFAI LLNAFSSALE ILTLWQQRPI VEKHYKYALY 600
  601 HPSAEAISSM IVDLPAKVLV SIVFNIILYF MTNLRRTAGH FFVFYLFSFT TTLTMSNIFR 660
  661 WIGAISRSMA QAMVPSSIFM LILVIYTGFT IPVRNMHPWF RWLNYLNPIG YAFESLMVNE 720
  721 FSGRRFDCAM YVPDGPGYAD VPLSSKICSG RGAVAGQDYI DGDTYLNTSF QYYRSHLWRN 780
  781 YGVLLAFMFF FLAAYIICSE LVRAKPSKGE ILVFPRGKIP AFAKEVRRDE EDAKTVEKPQ 840
  841 LVGEKSDDHV GAISKQTAIF HWQDVCYDIK IKGENRRILD HIDGWVKPGT LTALMGVTGA 900
  901 GKTSLLDVLA DRMTMGVITR EMLVDGRLRD DSFQRKTGYV QQQDLHLETS TVREALIFSA 960
  961 MLRQPASIPR KEKLAYVEEV IKMLGMEEYA EAVVGILGEG LNVEQRKRLT IGVELAAKPD1020
 1021 LLLFFDEPTS GLDSQTAWSI CSLMRKLADH GQAILCTIHQ PSAILMQQFD RLLFLAKGGK1080
 1081 TIYFGELGEN MGTLIEYFEK KGSTPCPKNA NPAEWMLEVI GAAPGSHADR DWSEVWNQSP1140
 1141 EREQVRAELA RMKAELLQKP EPPRTPEYGE FAMPLWSQFL ICLKRMFQQY WRSPSYIYSK1200
 1201 ATMCVIPPIF IGFTFWREPL SLQGMQNQMF AIFMLLVIFP NLVQQMMPYF VTQRALYEVR1260
 1261 ERPSKAYSWK AFMMASICVE LPWNILMAVP AYFCWYYPIG LYRNAGPGET VERGGTMFLL1320
 1321 ILIFMMFTST FSSMVIAGIE HPDTGSNIAQ LLFSLCLIFN GVLATPQQMP RFWIFMYRVS1380
 1381 PFTYLVSSVL STGLSGAEVE CSDIEILKIP PPDGQNCTSY LGPYAEGIHA KLLSDAPNGD1440
 1441 CRLCSISSTN QFLASLSINP DDNWRNVGIL FVYIVFNAFA AVFLYWLVRV PKKKSQQVKK1500
 1501 Q

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