YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19577360
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFVVPIST QRALIYSRPL SRDIVRELSV LDRVTNKAAE TWAKWEEADK GWKKHLVTWG  60
   61 NKVQQRIPFE EWGLKSIPSL KAQRRLDKSS ETKKVDVLFP GNAIKAEKIR SILRKIATER 120
  121 QDLHRKKMWW SLVAAPLTAP IALIPVYSLC LTEY

Type	Start	End	Confidence
Cytoplasmic	1	128	0.95
Transmembrane Helix	129	149	0.92
Non-Cytoplasmic	150	154	0.80