YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14331098
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIDLGAAIY IALKPILKIY TIIGVGFLLA RYNIVSMETA RGVSNMVVNA ILPCLTFNKI  60
   61 VSNISDEDIK EVGVIVLSAM MLFAVGSLCA VVTRYAMNVP KQWFWGLMFA GFFPNISDLP 120
  121 IAYVQSMSNG TVFSSSSVDK GVAYCCIFLM SQSFFMMNFG MWRVVGLDFR RNWDEEENDC 180
  181 QDIDSGVSDE ENSSLGEPQQ SRNLSQDDPS IYSNASEKPE TAPDIFLGGN HTNSTQSMNL 240
  241 LQPQNAYVKE NSPSLKSYRT HSIVTSPDLR LRTAGCHTAD CHRTRSYTID DRKRSSRRRA 300
  301 CSANDFITEY SAAD

Type	Start	End	Confidence
Cytoplasmic	1	15	0.56
Transmembrane Helix	16	35	0.86
Non-Cytoplasmic	36	71	0.63
Transmembrane Helix	72	93	0.92
Cytoplasmic	94	102	0.74
Transmembrane Helix	103	124	0.90
Non-Cytoplasmic	125	140	0.87
Transmembrane Helix	141	162	0.91
Cytoplasmic	163	314	0.91