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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5262950
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSAVRVFGK NRVSGLRFAS TSSKSPIHKS SATLRFGRSA KSGYSAFSFG KKVITGGAFL  60
   61 VAGSVGIALI SQFNDSVENG AKVDMTKPKV SPTEVAKHSS PKDCWVVIEG YVYNLTDFIS 120
  121 AHPGGPAIIE NAGKDVTKIF APIHAPDVIE KYIRPENRIG PLDGTMPDDL VCAALTPGET 180
  181 PEDMARKEQL RQSLPDIDSL VNIYDFEFLA SQILTKQAWS YYSSAADDEV THRENHAAYH 240
  241 RIFFKPRILV NVKEVDTSTT MLGEKVGVPF YVSATALCKL GNPKEGEKDI ARGCGESDVK 300
  301 PVQMISTLAS CSLQEIVEAA PSKEQIQWFQ LYVNSDRKIT EDLIKNVEKL GLKAIFVTVD 360
  361 APSLGNREKD AKVKFTNSNG AKAMEKSKVK ESKGASRALS SFIDPALNWD DIIEFKKKTK 420
  421 LPIVIKGVQC VEDVLKAAEI GVAGVVLSNH GGRQLDFSRA PIEVLAETMP VLREKKLDDK 480
  481 IEIFIDGGVR RGTDILKALC LGAKGVGLGR PFLYSNSCYG KEGVKKAIEL LKDELEMSMR 540
  541 LLGVTSIDQL SEKYLDLSTI HGRTVNVPRD NLYREVYVPH EPTQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle