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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16944705
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAPKLTEKS ASSKSTQKTT NYSSIEAKSI YQEPSATKKI LYSIATWLLY NIFHCFFREI  60
   61 RGRGSFKVPQ QGPVIFVAAP HANQFVDPVI LMGEVKKSVN RRVSFLIAES SLKQPPIGFL 120
  121 ASFFMAIGVV RPQDNLKPAE GTIRVDPTDY KRVIGHDTHF LTDCMPKGLI GLPKSMGFGE 180
  181 IQSIESDTSL TLRKEFKMAK PEIKTALLTG TTYKYAAKVD QSCVYHRVFE HLAHNNCIGI 240
  241 FPEGGSHDRT NLLPLKAGVA IMALGCMDRH PDVNVKIVPC GMNYFHPHKF RSRAVVEFGD 300
  301 PIEIPKELVA KYHNSETNRD AVKELLDTIS KGLQSVTVTC SDYETLMVVQ TIRRLYMTQF 360
  361 STKLPLPLIV EMNRRMVKGY EFYRNDPKIA DLTKDIMAYN AALRHYNLPD HLVEEAKVNF 420
  421 AKNLGLVFFR SIGLCILFSL AMPGIIMFSP VFILAKRISQ EKARTALSKS TVKIKANDVI 480
  481 ATWKILIGMG FAPLLYIFWS VLITYYLRHK PWNKIYVFSG SYISCVIVTY SALIVGDIGM 540
  541 DGFKSLRPLV LSLTSPKGLQ KLQKNRRNLA ERIIEVVNNF GSELFPDFDS AALREEFDVI 600
  601 DEEEEDRKTS ELNRRKMLRK QKIKRQEKDS SSPIISQRDN HDAYEHHNQD SDGVSLVNSD 660
  661 NSLSNIPLFS STFHRKSESS LASTSVAPSS SSEFEVENEI LEEKNGLASK IAQAVLNKRI 720
  721 GENTAREEEE EEEEEEEEEE EEEEGKEGDA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle