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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27525867
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALARLTAA LAVSMSLAAA ATINHDFNVT WVRANPDNAF ERPVIGINGQ WPIPTIECNV  60
   61 GDRIVINLNN QLGNQSTSLH FHGLYQNGTN QMDGPSGVTQ CGVPPGSSIT YNFTVDQPGT 120
  121 YWYHSHNDGQ YPDGLRGPVV VHDPEFPYSK EIDQEVVLTL SDCYHDEIRD LIPQFLSKTN 180
  181 PTGVSLSNAA LSMIAECTVS VQPGKTYHFR VINMGAFAGQ YLWFEGHKMR IVEVDGVYTK 240
  241 QAEADMIYLS AAQRVSFLLT TKNDTNANFP FVASMDTSLF DQLPKDLNYN STGWLSYDQT 300
  301 KTLPDPALVD ELNPFDDMTL EAYDGMELLP EPDYNVELNV VMDNLGNGAN YAFFNNITYK 360
  361 SPKVPTLYSV LSAGEQAENP AIYGEYTHPF VLKKDEIVQI VVNNLDSGRH PFHLHGHSFQ 420
  421 AIYRSNESAG TWEAEGGPSG KTFPKVPMRR DTIVLYPPGN MVLRFKADNP GVWLFHCHIE 480
  481 WHVVSGLMAT FIEAPTELQK KVSIPEDHLA VCRAGNVPTE GNAAGNTKDL LDLSGQNAPP 540
  541 DPLPEGFTTR GIVALVFSCI TGLLGICVVA WYGMSQPTEE APKAVAELIR EVGENDSETR 600
  601 LGRENGVVGV GAETGAEGLR QRT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle