YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPN1_NEUCR
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSRCILGL ACLWHGVIAS PLGAVPSNIP IATDLQTAAE TVAQPIANSA RKLHGKFLHI  60
   61 TGGQSRDDRK FYKPHSSTDE ADACHRGKGP AGVYGAEVSD CDSPFALINA TFDWIAANVK 120
  121 DDIDFVIWTG DTARHDSDEG VPRNADQVLG TNRWIADKMA ELFSDSTGRH LEIPIVPTLG 180
  181 NNDILPHNIL LPGPNSWLQH YTHIWRRFVP EAQRHSFQFG GWFYVEVIPN RLAIFSLNTL 240
  241 YFFDRNAGTD GCASPSEPGY KQMEWLRIQL HIMRERGMKA ILMGHVPPAR TDSKKLWDEN 300
  301 CWQKYSLWLR QYRDVVVSGV FGHMNIDHFF IHDERDINVG QLAGLADNSI DIREAMDDEL 360
  361 SVTGAADYLR ELRQNWAKLQ PPPTDSKNSG QLKKGKKGRK GKKKKPDVWG ERYSLSLVSP 420
  421 SIVPNYYPAL RIVEYNISGL EDTPVWRDAA KDAMSIELEQ NDRQKHLDLK RQHPSHMEDD 480
  481 DEIDAQKKKG KKHKGGDSKP KKPDFLIPHP PAKSSPPGPA YSPQPLTLTG YTQYFANLTH 540
  541 INNITTEASS ALLDHDEEEE TWVDWLLRWR KGRHGNRKPI HPKPDPREFQ FEVEYSTFND 600
  601 KLYKLRDLTV KNYVELAYRI SKQPKKGKAK SIDVSYESAA EEEEEEEEEE EEDLFEEVEE 660
  661 TDEEEEQEDD DLSDGEEVDD DSDEDELETE TFKKHDKKKH KKKKGKKRQN KVWMHFLTHA 720
  721 FVSTVEKEDL KKFT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle