YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11124698
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLTFAISI FTFLSAFAYA DDGINTLDYS TAIYDKLVEL GDLNQVAYCI QELDRDAFKT  60
   61 GEFSCAIDYC SQHQNIDVLK IFVAPGNESG SGYILVDNTD KRILVVFRGS QTIFDWIADL 120
  121 TFIATPYTPL TTDGQSNYTC TDCYCHHGFY ETLKQFSDEV FPFVKELKEG NYSDYQVVTT 180
  181 GHSLGGALTT LAGIEFLLMG YDPLVISLAG PKAANDKLAE YINNIFDTDS VISDIVAGKD 240
  241 VISGAYLRAV HSGDVVPLLP PTSYFWHAGA EFFIDKFALP FPKSVVYFRG DYDYETITQS 300
  301 ELTSYIKVHN VLFIYDHISY FVSMAKCIVA DVFTLF

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	336	0.99