YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7799615
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKMFKLNK LWLKYKRRLN NDIELENELG LRIRNGIHMV ASTIGPYAKI ILPNFRAVHY  60
   61 FYIIFMSFLG SILVYPVKNM RYVDALFLTG GASTQAGLNT TDINTLYLYQ QIIVYIITTL 120
  121 TTPIFIHGSL LFARLYWFER HFDNIKERSK LNFKMRRSAT LAGRRQSFDA TRINTVNNQG 180
  181 LGFNQTNQTP SLKNEELTVH NTSPQSSSTI PKLVEKDHNN NSDIDHISEP SDSENEQGVP 240
  241 QDARMVKVSS DKEGPKFGNL PHPSNIRSKE IEPSDMYRSI AMLRDNFKSN SPKNNDDDDV 300
  301 LIIKSPNEIE SDCQKPIFTK RSQIHFNVNK QPIKKWKQRK RKLTRGNQQW SKLKKSFSNT 360
  361 TTNSKKRVES LSQSTSDEED DASIDSENAI DPLSADVNDD LNDEDDNDAD DEEAMLDDED 420
  421 GDEVNDNEDE GYLQDDYVLE RAQSNLVIPS TDATGGEKFS KRSNTLDVTP GRKNSFIKSP 480
  481 TFEKMIKKKK RKSKRSTNRL FKIRTPSLYM QKSTASSGNS MNNDDEEGYN GDNDGHSLNK 540
  541 SNEVPTICSW VPTVGRNSTF VHLNEEQKEE LGGVEYRAIK LLIKILIFYY VGFHILAFIF 600
  601 LLPWILKMPN YSNIVREQGV SPTWWAFFTA QSSFNDLGLT LTADSMQSFN RSIYVMVVMS 660
  661 FFIVIGNTGF PVFLRFIIWI LFKFARPSSL FKESLGFLLD HPRRCFTLLF PSIPTWWLFS 720
  721 ILVVMNVVDL VLFIILDLNN TYLEEIPVGY RIMDGLFQAF STRTAGFTVV DLSQLHPAIQ 780
  781 VSYMLMMYIS VLPLAISIRR TNVYEEQSLG VYLKEDNNEH EDVEKTPKTF VGAHLRNQLS 840
  841 FDLWFIFLGL FIICIAEGSK LNKNHFRFSV FSILFEIISA YGTVGLSLGF PNVNASFSYE 900
  901 LTTLSKLVII AMMIRGRHRG LPYSLDRTIM LPDDDVERRD EVQEHHAIRR STTMDTSGGT 960
  961 VNNSNDHNAL RRAISRRASN FGFDTNIFRG RSSANNKVKT HFPNYKVIPE NHEMNNLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle