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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22326737, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKMKHLLRK LHIGGSSGVG GGFADHHRLD DSTRPMIDPS PILSTSPSPA STSSVSSSGF  60
   61 GNASTTMPRL DTFEPVGRDL TAVDGVDFNL MEEEYQVQLA MAISVSDPDP RENADTAQLD 120
  121 AAKRISLGVS APVTDADSAV DFLSLRYWGH KVINYDQKVR DGFYDVYGIT SNSLSQGKMP 180
  181 LLVDLQAISI SDNVDYEVIL VNRLIDPELQ ELERRVFALA SECPDFAPGQ VSSDLTQKIA 240
  241 NIVVEQMGGP VENADEALRR WMLRSYELRN SLNTTILPLG RVNVGLARHR ALLFKVLADR 300
  301 INLPCMLVKG SYYTGTDDGA VNLIKLDDKS EYIIDLMGAP GALIPSEVPS SFLPVSCTDT 360
  361 RVFPENLDSL QHSSPVLEKE IETPAFSVSK EADSRSGMVA NFFTGNQEEN SDRCAVEKHQ 420
  421 TERFEHDFGK LMHSQQISGE NMPPFSGKPT CAQKVKVKNV SKYVISAAKN PEFAQKLHAV 480
  481 LLESGASPPP DLFMDINPHN LRGKNLLQEL RQESSNSMVS GIPCYPEKVA EQLRESERNP 540
  541 TAESYQQSVE VDLSMKRNFD LDNTGKASSS ENMEVGTADG ESAVCDSHDQ GINPLLGEAA 600
  601 KWEIMWEDLQ IGERIGIGSY GEVYRAEWNG TEVAVKKFLD QDFSGDALTQ FKSEIEIMLR 660
  661 LRHPNVVLFM GAVTRPPNFS ILTEFLPRGS LYRLLHRPNH QLDEKRRMRM ALDVAKGMNY 720
  721 LHTSHPTVVH RDLKSPNLLV DKNWVVKVCD FGLSRMKHHT YLSSKSTAGT PEWMAPEVLR 780
  781 NEPANEKCDV YSFGVILWEL ATSRVPWKGL NPMQVVGAVG FQNRRLEIPD DIDLTVAQII 840
  841 RECWQTEPHL RPSFTQLMQS LKRLQGLNIS NRANTSESLM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle