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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18376015
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSAVSTIAH YLYKLVYYFI YLVLLAFLIV SPIDLIRQAI ITKQNYSILI VALCYLVTIL  60
   61 IIVFIYATRL YYNKAVLDSI PKSWVPVEKG DVPRDVRQLI VARLSRSAAI AYEARPRLPL 120
  121 PPTSAAPGSG PASVPATANV PHPTSQRQEV ERNHDEGEDE EPQQEHSGRI ATAAKEASKE 180
  181 ATDRFAGRQS RWKPKVRRGL SAGTIEGRES EHDSTTTHPS GHDEPTCINI GALHGGSHIW 240
  241 GEIEHPGWGP PTSPDLANVQ YDTVIRELPN LIEAKAITLA PPDRACEGEA EGEAGRMDPP 300
  301 LLDPDAVELL QRHESMGLRE YLTSLTELGV VAPSEALSEF IKLYERARYS TRPLSLDEFR 360
  361 RLMHVFAEVL KDMRPLDPMV LDEIAREYEY DGAEDNDPGI AYNAGTEGDG SNDRRFFSPY 420
  421 SQQPQQPSPN SFYESDIDND APRRSYSSGD LRKDSDGGSM YHAGNEPEHY IASRQHRRQQ 480
  481 QQREPPRTPT PKTPKRRRRT AKYTTAAHPS DPGPSDANPF RGLNHLTRQH TNSSYLSSSS 540
  541 SLRSTHTHNH LRPETAKTAR THLSSRSHRH HHHHHHHPYQ RSANRESSGT CSTTYSWQQQ 600
  601 LRQFRTAPAS PRSVALTGHT GLCRAETNGT GISPGEVSQL SLASSSGKGA SVRSGENSDS 660
  661 SSGSVIRLAG RGDQTDLPYV LMPTPSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle