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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13171071
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETHTWNFTTG FVNANPDGVY ERDDVIGLNG QWPLPVLEAD KGDRIELYLT NGFEDYNTSL  60
   61 HFHGLFQNGT NSMDGPELIT QCPIPPGETM LYNFTVDQVG AYWYHSHTAG QYGDGMRAAF 120
  121 IVHDGSDDDD FPYEYDEEFT FTISEWYHES SVDLIPNFMS RFNPTGAEPI PQNFLFNDTR 180
  181 NFTWNVEPSK TYKVNLINVG GFVSQYLWME DHTFKVVQVD GVYTQPNETD MIYITVAQRY 240
  241 TVLIETKDDT SRNYALMQRV DDTMLDVIPK DLELNGTNYI VYNESAGLPE EYKVESLDIF 300
  301 LDDFWLEPLE AQEAYPDPDY QIVVDVAMDN LDDGVNYAFF NNLTYVAPKV PVLGTVFSAG 360
  361 EDAINPLVYG SNTNSFVLEK DEVIEIVLNN LDTGKHPFHL HGHVFQTVVR GPDYGEESTP 420
  421 VPYNASEAHD IPENPMRRDT VYVNPQSYFV IRFKADNPGV WFFHCHIEWH LDQGLALVLI 480
  481 EDPLSIQSQQ NLDDNWKRMC EVNNMPYVGN AAANTENFLD LTDENVQVKN LPAGFTARGI 540
  541 VALVFSCIAG ILGCVAIGLY GLAATDDNPV KLSQDLGIDE EFIQDETSSQ LSHNGSKDTT 600
  601 EKTATELLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle