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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111057805
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAPNMPPP SEDSPSYVPY RRPLSPDRSY SPTRTSVDYS RPAASSISYE PADLNGSPRP  60
   61 GTPSSRYGGG RPGSPKRPLP PAPLFSGAAR PVSRDSEMTM DMTDMTSIPI DEDDPFTERG 120
  121 ESRPDLHSRA SYMSDDTYTD VYTTVDEKEK VEHYGPAPDG AQTRRGARDA VMTKKEVRLI 180
  181 NGELILECKI PTILYSFLPR RDDIEFTHMR YTAVTCDPDD FVERGYQLRQ NIGNARETEL 240
  241 FICITMYNEN EIDFTRTMHG VMQNISHFCS RMKSRTWGKD GWQKIVVCII SDGRGKVHPR 300
  301 TLDAIAAMGC FQEGIAKNHV NQKEVTAHVY EYTTQVSLDS DLKFKGAEKG IVPCQMIFCL 360
  361 KERNSKKLNS HRWFFNAFGR ALNPNVCILL DVGTKPGPKA LYHLWKAFDT DSSVAGAAGE 420
  421 IKAGKGKAWL GLLNPLVASQ NFEYKMSNIL DKPLESVFGY ITVLPGALSA YRYHALQNDH 480
  481 TGHGPLSQYF KGETLHGQDA DVFTANMYLA EDRILCWELV AKRSEQWVLK YVKAATGETD 540
  541 VPDSVPEFIS QRRRWLNGAF FAAVYSLLHF KQVWSTDHTI WRKILLHIEF VYQFVQLLFT 600
  601 FFSLANFYLT FFFVAGSLAD PKMDPFGHNI GKYVFYILRY TCTLLICMQF ILSMGNRPQG 660
  661 AKKMFFWSMI MYGVIMAYTT FASFYIVVIQ LKDPKAPKTL GNNVFTNLII SSATTIGLYF 720
  721 VMSFMYFDPW HMFTSSAQYF ALLPSYIATL QVYAFCNTHD ITWGTKGDNV AKTDLGDAKA 780
  781 KTKNVVELEM PSEQLDIDSG YDEALRNLRD RVEVPEPPIS ESQQQEDYYR AVRTYMVVIW 840
  841 LISNAILAMA VSEAYGNRAV TNNFYLTFIL WAVAGLAFFR AIGSTTFLVI NWIHKIMETK 900
  901 LKWEDRMEDK KGRTNLGGGR RLGGWKAKFG LGWGGGSGLT SWMSGSSIKS KMSSMAPSSW 960
  961 GGSSVGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle