YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18693266
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQDALTTVA LRNTFYKDSQ RKVILALLIA LLVNIIMAFM LVYMITHPPA PKYFATSING  60
   61 RITPLFPLNE PNQSDSAVLQ WANQAAIAAF TYNFVNYRDE LQASSGFFTP EGWDQFLNAL 120
  121 QQSNNLDAVK AKKLIVSAVA TRAPIILQKG VLNGNYSWRV QMPILVTYQS ASEFTQQNNV 180
  181 VTMLITRVST LNSPRGIGIS QFVVGPAAGG VS

Type	Start	End	Confidence
Cytoplasmic	1	22	0.90
Transmembrane Helix	23	45	0.92
Non-Cytoplasmic	46	212	0.73