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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2980815
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQRISSKLH RRFLSGLLRV KHYPLRRILL PLILLQIIII TFIWSNSPQR NGLGRDADYL  60
   61 LPNYNELDSD DDSWYSILTS SFKNDRKIQF AKTLYENLKF GTNPKWVNEY TLQNDLLSVK 120
  121 MGPRKGSKLE SVDELKFYDF DPRLTWSVVL NHLQNNDADQ PEKLPFSWYD WTTFHELNKL 180
  181 ISIDKTVLPC NFLFQSAFDK ESLEAIETEL GEPLFLYERP KYAQKLWYKA ARNQDRIKDS 240
  241 KELKKHCSKL FTPDGHGSPK GLRFNTQFQI KELYDKVRPE VYQLQARNYI LTTQSHPLSI 300
  301 SIIESDNSTY QVPLQTEKSK NLVQSGLLQE YINDNINSTN KRKKNKQDVE FNHNRLFQEF 360
  361 VNNDQVNSLY KLEIEETDKF TFDKDLVYLS PSDFKFDASK KIEELEEQKK LYPDKFSAHN 420
  421 ENYLNSLKNS VKTSPALQRK FFYEAGAVKQ YKGMGFHRDK RFFNVDTLIN DKQEYQARLN 480
  481 SMIRTFQKFT KANGIISWLS HGTLYGYLYN GMAFPWDNDF DLQMPIKHLQ LLSQYFNQSL 540
  541 ILEDPRQGNG RYFLDVSDSL TVRINGNGKN NIDARFIDVD TGLYIDITGL ASTSAPSRDY 600
  601 LNSYIEERLQ EEHLDINNIP ESNGETATLP DKVDDGLVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle