YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1870125
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSLLQSGH RRVAASSCAT MVRCSSSSTS ALAYKQMHRH AARPPLPTLD TPSWNANSAV  60
   61 SSIIYETPAP SRQPRKQHVL NCLVQNEPGV LSRISGTLAA RGFNIDSLVV CNTEVKDLSR 120
  121 MTIVLQGQDG VIEQARRQIE DLVPVYAVLD YTNSEIIKRE LVMARISLLG TEYFEDLLLH 180
  181 HHTSTSSGGA DANELVAEIR EKQFHPANLP ASEILRLKHE HLNDVTNLTN NFGGRVVDIS 240
  241 ETSCIVELSA KPTRISAFLK LVEPFGVLEC ARSGMMALPR TPLKTSIEEA ADEDEKINEI 300
  301 VDISQLPPG

Type	Start	End	Confidence
Signal Peptide	1	31	0.97
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	309	0.99