YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18654317
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAAFSLLP STSSTTFNRH ATTKLLNLKF LHNHRNKPFF TTTIKSLSSP SPTPVLTQDD  60
   61 LKKLAAEKAV DSVKSGMVLG LGTGSTAAFA VSRIGELLSA GKLTNIVGIP TSKRTAEQAA 120
  121 SLGIPLSVLD DHPRIDLAID GADEVDPDLN LVKGRGGALL REKMVEAASD KFIVVVDDTK 180
  181 LVDGLGGSRL AMPVEVVQFC WKYNLKRLQE IFKELGCEAK LRMEGDSSPY VTDNSNYIVD 240
  241 LYFPTSIKDA EAAGREISAL EGVVEHGLFL GMASEVIIAG KTGVSVKTK

Type	Start	End	Confidence
Signal Peptide	1	21	0.76
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	289	0.99