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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13940365
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFLSWFGLVL TASSNSNVGI QDNFPFTSVV DILSQNVEFS TFLRAVQRNG FIPYLNELQN  60
   61 YTLMAPVNSA FIDNEPEDKN YKFDIENYLI HDSVLLTSGI DQGISVISEG VKFPYVLEKL 120
  121 SDDTIIVNDV KLVDSDLLPN FQNASVHGIG EKINTPFGLR NFLQKIEHDF NDFHLFNNFT 180
  181 RNIPAVESIT TNRTILIPSD YNWHNSFSEV EINYITDAFN SLQRMEGDTR YIWNTDRQNF 240
  241 IQNIIIDKIL GGMVPDVHYP ENLNGDPLDF QSERNGSVLL VNGSKSSDLS NMAFNRGLVH 300
  301 SFDNLEIIKD IISFTAEKYL HGINCSDFVR ELYFRNLQCL IRDSRETQGE EKTIFVPDVP 360
  361 SAAYDGFSRP GLLYHFVGSK IWLDQEFSEE NLGKSRMFES KFCDSDENLG GNCQRIKIIK 420
  421 DRGEYFINEK YRVIHEEPFQ IGNTLIYLVS DKMKLPGDLT PSINPFYGCS RSLMFLSQLN 480
  481 ILDLPLNKEG YTILMPCFDS WEFLELNLQF LENNMTAINS IMKNLIIDGL IYSDSKDTTF 540
  541 ETKNLLGDSI LVQAERLHNG EGTELNLNLS SVGTKIKIKN DLDLFFSQGV VHPLGQLYLP 600
  601 KSVTVTLIDL IRTTGTTQLI ELFEKFDDLS SIIHGNKPYS LLVPTESSLS LVGDILNSTK 660
  661 LLNLLKLHVI EGDFTSSLLH CEGNVTTLLG DSLFCRKDSQ ENYFLGVLNG AQREVRIMKK 720
  721 GCSSHNSCVF LIDRPISLQW LNRRKIWFGL PRSPLGIAML TETVILFIGL SLFFFKRKKV 780
  781 PGTNLVSPNN DDAEITRPLI APGENTSPDG RNET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle