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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|164426163, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKGTKSSA PAPAAASSSA ASQPTSKSKK DSKKAAGPSE GDFIVFSNSD KEPKGKRGGA  60
   61 KAGPSKPAEE LDAGPPKPTV KQLIGGHSWT GKLPVNLLSE HCQKQKWERP DYNTIKTKDG 120
  121 FSVFVTLSAK NPKTQEVTTL PPFKLPPSHV HLAYKPTALE AKHFAATYAL YRVCSMKNMH 180
  181 MTLPPDYRSL WKEFEALKKQ DVKEGKAWMY EADPFQAQRE REEAKAAAEK KRAQLQAAKE 240
  241 KAANEPGVSL AFRGSGSGGA GGGGAHNVMR GWANVPKIEM GNKTRSQLED LLRRETVWNP 300
  301 NGVVMSASQK AAIVKEFKDL GFRQSHIEEA VEECKDREEA LEWLLVHIPE DDLPRWALPE 360
  361 KYSAGVTVAA TDLKREGAIT RLAQSGYSID LCRKLLALHN GDEAKAAEDL QKLLLASGSE 420
  421 SIDDSSQDAD GLDTWRDADE CWEEEMATLE ACFGEKFSKI SPEICEIKLE GVKNGSQTNV 480
  481 DACVQFRKSE QYPTQVILAM VAALPSYIKL SVIKQALAYA LTLEGEEMKI FYVASWVQEN 540
  541 INDIIEKPGR IREVAAVASA ASEEPKKAVK RARRAPRCPK PINWSPDPRS TEEWRARTES 600
  601 PSYKKMLYAR QNLPAWQVQD YLIQTVSENQ VTIISGETGS GKSTQSVQFI LDDLYSKGLG 660
  661 KSANIIVTQP RRISALGLAD RVSDERCSQV GQEVGYSIRG ESKTSPNTRI TFVTTGVLLR 720
  721 RLQTSGGRVE DVVASLADVS HVVVDEVHER SLDTDFLLAI IRDVLYKRRD LKLILMSATL 780
  781 DAASFKDYFT VDGKNVSVGL VEISGRTYPV QDYYLDDVIH MTGFSIGNNR EYYYDDNAGS 840
  841 KSKEDPNDDP INKIIQRMGS RINYDLLVET VCAIDSELAE TQKAGGILIF LPGVAEINRA 900
  901 CNALRAVPSL HVLPLHASLE TKEQKRVFAS APPGKRKVVI ATNVAETSIT IDDIVAVIDS 960
  961 GRVKETSFDP QNNMRKLEET WASRAACKQR RGRAGRVQAG KCYKLFTRNL EMQMAERPDP1020
 1021 EIRRVPLEQL CLAVRAMGIK DVSHFLSRAP TPPEATAVEA SITMLRRMGA LDGEELTALG1080
 1081 QQLAMIPADL RCGKLMVYGS IFGCLDDCVT IAAILSTKSP FVSPQEKREE AKEARKRFSQ1140
 1141 GDGDLLTDLR AFQEWNDQMQ ERMGQSRVRA WCGDNFLNYQ TLSDIASTRS QYYSALKEMG1200
 1201 IIPHNYSESN NSQQTKSMAL LRALTASAFS PQIARIQFPD KKFAASMTGA VELDPEAKTI1260
 1261 KFFSQENGRV FIHPSSTLFD SQGFTGNASF MSYFTKIATS KIFIRDLTPF NAYTLLLFSG1320
 1321 AIDLDTQGRG LVVDGWLRLR GWARIGVLVS RLRGLIDKLI TMKVENPSLD VEKNDIIKTV1380
 1381 VKLVELDGLD A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle