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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16944701
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPRASRPHG VEVTGLLHVT NLTSGSVEVP QPPSMTQPDV FDIARSRTAD ALWLKIAWLG  60
   61 TGKTGWVEVG SGPCFTKPGT EPCRPRRVPG SSTFQNLRWD SKQDAACWAP TTDDRTASKL 120
  121 QYPPPPRWTI SLSCDSRHST DPSHWLPDGH STSSSPFPKS VRCSPRPEPR STKLKTSTMS 180
  181 EHLRPPISAP SHSPTLHATD VKYDQQDPEE DITIGTRTPK PYCRQSSELL EPSERLLHRA 240
  241 ATVALSQRQP SPTSAHNSNP ASDSGTEADD EHFLKGLPAP KTRSHKGLRG KNEPLSGTST 300
  301 PLLSPNAPDE NGRGPDLNSR SGFSIRLKRS EAERARRRKE VVRRGAEVLL LACQGVLVAS 360
  361 NHDVQPFIQT YRKVITSANT FPPELSALGW LFSTLLALYP LRLVAWAYRR GNPSNQLPLS 420
  421 VPTSFDPAPA LYPQLIPLFV SLLVAPNVEG VVLPNVILSI CSLPRPLIPG AGYWEEFSST 480
  481 QWLLSCIPLV AGGSATDPEI LTLLYPLHQT LCLLLQQLTT TSLLIAELQL LSVALINVLL 540
  541 LARSPQVVIL KALLWGGGLG IIALCGKVIQ WGISLARVPK WRFKRPSVSK SGSTSGFWKF 600
  601 FRAAKRTYYD GKTDNEEVLS DSDHVVSGHN RNRSSATPSW DLSFLKGRTR EESITSAEEN 660
  661 SLRQANGADV RFDVQEPPSP QQPSSRRHTL PSLGRITSIV RSQTTPSGRR KRSASSSVRA 720
  721 FFSLTQGQAA VRKWLYAGWV YACILVVILV GVRECVGRYA LAGQEPVGWA LGYLFGDIPE 780
  781 FRLEVVKAGL ERWICLPIRA DGEASGALGG WVQLVRQSVF GEANTRLLLS GYWLVIIIIG 840
  841 LAVVFRLSPF YEVDTRRKVF HFMMVAMFLP TIFIDPTYIA LALSIVLAIF LLVDLLRASQ 900
  901 LPPLSTPIAQ FLTPYVDGRD LRGPVVISHI FLLIGCAIPL WLSLAALPRI GEGPLAGWEV 960
  961 PLRDISMVAG VVCVGLGDAA ASLIGRRWGH RKWLWGGGKS IEGSIAFATA VFVGLMTANV1020
 1021 WLFVGGWPST VGMLSTVARE AELNDGFGSS EGAAAGVGEL AMDIIGKLWE ALSQLPKASW1080
 1081 SATVVKTATK R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle