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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|164426859, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSQNSDVRA LLIVLILLWI FFSPDSSDPA SLTPPEIAHA REARFQGALD VLNTTRWGDF  60
   61 APDAPSSTSP RPPSETDGPA GEIGKGNGDK HEQGPQFLNI TGFSQLDGKG YAWEDLGRFR 120
  121 NRCREWSRNA FPSAATVGPL DDDSWEPSMV SGTWKNATGT LHGTWVRRPG TVVRQAAEYN 180
  181 LSAIAPGATW PSSLGEWGRN ITGDHGKIEL RIDEDEGDGV YEEKVEGKTS RGANLAREIQ 240
  241 AVATIQDDAS EASSWSLLLH GVHWPRQGAI LLTTSSEKFD GIFGLPHLAP GPNFFHTGQH 300
  301 LLNETLGKII QARKKSKYGF PGNPWGSRME DDDSFPAQCE YVMYLQLQPL ELSRQYESPQ 360
  361 LLESYIEELE RELRHPTGAP IGRIPDLRAS MVAWSPDCSF FLESKGPPEF PSVDGEHLVG 420
  421 MKEAMFTYTA KEWLIAFAAV MLGQIWLFKE QMKLSNTPST TGRVSFWTIG AMLFADGMIF 480
  481 VTACAWSLNA TITLLPCLLV TFAAFISMFI EGAFLSEVWK IQEPERRIRE REREQAAAAA 540
  541 AAAAAANRNA SSSSAASTTP PPTTQPEPPT TQPAPPPPPS QPRQPIIVPS DGDIDEAEQL 600
  601 NNLLSGASAL PLPATARQPG LPAPTNEPRP PTPFSTITGR FVLAGLFLLF ISAVATSWPS 660
  661 HIRSFYVNTL SFLYLSLWTP QIIRNAQHNV LLADPDPFAF LVLVAWVWIQ LWVICAQSIL 720
  721 GPRFGVPKGW VREAWDYHPV LRDDDLEGVS LPIGLARTGT GLSSSSSSSS PTEERVRGRA 780
  781 WSVVSLGGPA AAAETGEGSA AAAAAAAATD SAGGTRNRER EKEKEREKQK GVTMRSVDCA 840
  841 ICRELLEVPV FNNNKGSGGS SDSAASGITG VFARKAYMVT PCRHIFHTNC LEGWMKYRLQ 900
  901 CPICREELPP L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle