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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18652148
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRGPQAIL ILLSGALALT GTQAGPHSLS YFYTAVSRPD RGDSRFFIVG YVDDTQFVRF  60
   61 DSDAPNAKME PRAQWIQQEG QEYWDRETQI SKETAQINRV DLNTLRGYYN QSEAGSHTLQ 120
  121 RMFGCYLGPD GLLLRGYDQD AYDGADYLAL NEDLRSWTAA DMAAQISKRK REAADEAERM 180
  181 RSYLQGRCVE WLQKYLEMGK DTLQRAEPPK THVTRHPSSD LGVTLRCWAL GFYPKEISLS 240
  241 WQREGQDQSQ DMELVETRPS GDGTFQKWAA LVVPPGEEQS YTCHVQHEGL QEPLTLRWDP 300
  301 AQPPVPMVGI IVGLVLVLVA GAMVAGVVIW RKKRSGEKGG SYTQAAGSDS AQGSDVSLTK 360
  361 DPRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle