YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2168158
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHSLRYFET AVSRPGLGEP RYMEVGYVDD TQFVRYDSDA ENPRYEPRAR WIEREGPEYW  60
   61 EEQTQNAKGN EQNYRVSLRN LLRYYNQSEG GSHTIQLMYG CDVGSDGRLL RGYEQSAYDG 120
  121 RDYIALNEDL KTWMAADTAA QMTRNKWERA RYAERSRAYV EGTCVEWLSR YLEHGKEALL 180
  181 RSDPPKAHVT LHPRPEGDVT LRCWALGFYP ADITLTWQLN GEDLTQDMEF VETRPAGDGT 240
  241 FQKWAAVVVP SGEEQNYTCL VEHEGLPKPL TQRWEPSPST NTNMGIDVTS VVLGALAVFV 300
  301 VLAIIGAVVC VVRRRRRRRR NTGGKGDYTP ARA

Type	Start	End	Confidence
Non-Cytoplasmic	1	290	0.96
Transmembrane Helix	291	312	0.95
Cytoplasmic	313	333	0.99