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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1771570
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAHAWPTAA LLLLLVDWLL LRPVLPGIFS LLVPEVPLLR VWAVGLSRWA ILGLGVRGVL  60
   61 GVTAGARGWL AALQPLVAAL GLALPGLASF RKLSAWGALR EGDNAGLLHW NSRLDAFVLS 120
  121 YVAALPAAAL WHKLGSFWAP SGHKGAGDML CRMLGFLDSK KGRLHLVLVL LILSCLGEMA 180
  181 IPFFTGRITD WILQDKTAPS FARNMWLMCI LTIASSALEF AGDGIYNITM GHMHSRVHGE 240
  241 VFRAVLHQET GFFLKNPTGS ITSRVTEDTS NVCESISDKL NLFLWYLGRG LCLLAFMIWG 300
  301 SFYLTVVTLL SLPLLFLLPR RLGKVYQSLA VKVQESLAKS TQVALEALSA MPTVRSFANE 360
  361 EGEAQKFRQK LEEMKPLNKK EALAYVTEVW TMSVSGMLLK VGILYLGGQL VVRGAVSSGN 420
  421 LVSFVLYQLQ FTRAVEVLLS IYPSMQKSVG ASEKIFEYLD RTPCSPLSGS LAPLNMKGLV 480
  481 KFQDVSFAYP NHPNVQVLQG LTFTLYPGKV TALVGPNGSG KSTVAALLQN LYQPTGGKVL 540
  541 LDGEPLVQYD HHYLHTQVAA VGQEPLLFGR SFRENIAYGL TRTPTMEEIT AVAMESGAHD 600
  601 FISGFPQGYD TEVGETGNQL SGGQRQAVAL ARALIRKPRL LILDDATSAL DAGNQLRVQR 660
  661 LLYESPEWAS RTVLLITQQL SLTERAHHIL FLKEGSVCEQ GTHLQLMEKG GCYRSMVEAL 720
  721 AAPSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle