YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56660, gi\|321322
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WERETRKARD TGRNFKVNLR TLLRYYNQSD DESHTLQWMY GCDVGPDGHL LRGYCQEAYD  60
   61 GRDYISLNED LRSWTATDMA SQASKIKSEE VGEAHHQRAY LQGPCVEWLH TYLHLGKETL 120
  121 LRSDPPKAHV TLHPRPEGDV TLRCWALGFY PADITLTWQL NGEDLTQDME LVETRPAGDG 180
  181 TFQKWAAVVV PSGEELKYTC HVEHEGLPEP LALRWEPSPF TDSSMPVIVV LGAVAIIGAV 240
  241 AIIGAVAIIG AVVRRRKRNT GEKGSYAHVL GSKAFQISDW PQKA

Type	Start	End	Confidence
Non-Cytoplasmic	1	226	0.95
Transmembrane Helix	227	251	0.92
Cytoplasmic	252	284	0.95