YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51490739
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLYALCKKT WAISLLVFVL LVSLTPVSQA AAFLSVAQAL EHQNNSVQTV KGYVVGQPTG  60
   61 TSTVITSNYP NDYALALAAS SNETNTDKMV YVQIPSNLRS TFGLQSHSEL RGKSLTVTGT 120
  121 LTPYFSHPGI KSVTSISTET GGTDPAPDPT EPTVPVEDYY RTVAEKTGNS LKTELHNIID 180
  181 HHTELSYSAV WEALKETDED PANANNVILL YTGRSQAKST NGVDDWNREH VWAKSHGDFG 240
  241 QSYGPGRDLH HLRPTDVSVN STRGNLDFDN GGTEHSEALG NYFDSDSWEP RDEVKGDVAR 300
  301 MLFYMAVRYE GDVSDEPDLE LNNTVNNGTA PYHGKLSVLL QWNAQDPVDD RERRRNDIIY 360
  361 SDYQHNRNPF IDHPEWVNEI WN

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	382	0.99