YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9801834
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ILMCMSNLPE WILAVENTLL GIYTFEILVK VIARGIWAGS FSFLGDLWNW LDFSVTLFEL  60
   61 ITRSSPLSSL PMFKTIRTLR ILKIIPLNHG LQSIVVTLVQ CLKKLLGAIA LALFFLTVSS 120
  121 LFGMGLFMGN LKHKCVRWPQ EDGNDVMYNG T

Type	Start	End	Confidence
Cytoplasmic	1	18	0.71
Transmembrane Helix	19	38	0.62
Non-Cytoplasmic	39	46	0.46
Transmembrane Helix	47	62	0.46
Cytoplasmic	63	80	0.53
Transmembrane Helix	81	99	0.58
Non-Cytoplasmic	100	107	0.62
Transmembrane Helix	108	129	0.93
Cytoplasmic	130	151	0.85