YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9801832
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPPDWTKN VEYTFTGIYT FESLIKILAR GFCLEDFTFL RDPWNWLDFT VITFAYVTEF  60
   61 VDLGNVSALR TFRVLRALKT ISVIPGLKTI VGALIQSVKK LSDVMILTVF CLSVFALIGL 120
  121 QLFMGNLRNK CLQWPPDNST FEINITSFFN NS

Type	Start	End	Confidence
Cytoplasmic	1	76	0.74
Transmembrane Helix	77	96	0.60
Non-Cytoplasmic	97	103	0.56
Transmembrane Helix	104	125	0.92
Cytoplasmic	126	152	0.67