YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5640123
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLRTLRRYYN QSDDESHTLQ WMYGCDVGPD GHLLRGYCQE AYDGRDYISL NEDLRSWTAT  60
   61 DMASQASKIK SEEVGEAHHQ RAYLQGPCVE WLHTYLHLGK ETLLRSDPPK AHVTLHPRPE 120
  121 GDVTLRCWAL GFYPADITLT WQLNGEDLTQ DMELVETRPA GYGTFQKWAA VVVPSGEELK 180
  181 YTCHVEHEGL PEPLALRWEP SPFTDSSMPV IVVLGAVAII GAVAIIGAVA IIGAVVRRRK 240
  241 RNTGEKGSYA HVLGSKAFQI SDWPQKA

Type	Start	End	Confidence
Non-Cytoplasmic	1	209	0.95
Transmembrane Helix	210	234	0.92
Cytoplasmic	235	267	0.95