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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: B3GTG_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQFMSVVRF KFGFTSVRMR DWSVGVSIMV LTLIFIIRYE QSDHTHTVDD SSIEGESVHE  60
   61 PAKKPHFMTL EDLDYLFSNK SFFGEEEVSN GMLVWSRMRP FLERPDALPE TAQGIEEATL 120
  121 AMKGLVLEIN REKRAYSSGM VSKEIRRICP DFVTAFDKDL SGLSHVLLEL PCGLIEDSSI 180
  181 TLVGIPDEHS SSFQIQLVGS GLSGETRRPI ILRYNVNFSK PSIVQNTWTE KLGWGNEERC 240
  241 QYHGSLKNHL VDELPLCNKQ TGRIISEKSS NDDATMELSL SNANFPFLKG SPFTAALWFG 300
  301 LEGFHMTING RHETSFAYRE KLEPWLVSAV KVSGGLKILS VLATRLPIPD DHASLIIEEK 360
  361 LKAPSLSGTR IELLVGVFST GNNFKRRMAL RRSWMQYEAV RSGKVAVRFL IGLHTNEKVN 420
  421 LEMWRESKAY GDIQFMPFVD YYGLLSLKTV ALCILGTKVI PAKYIMKTDD DAFVRIDELL 480
  481 SSLEERPSSA LLYGLISFDS SPDREQGSKW FIPKEEWPLD SYPPWAHGPG YIISHDIAKF 540
  541 VVKGHRQRDL GLFKLEDVAM GIWIQQFNQT IKRVKYINDK RFHNSDCKSN YILVHYQTPR 600
  601 LILCLWEKLQ KENQSICCE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle