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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47264590
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLLISLLG CLVVALPSAS AQKKVKWCVT TQNEQSKCRH LATKAADIEC HLQPTVIDCM  60
   61 RSIAAGGTDI VTVDGANVFT GGLNNYLLRP IIAEKKKECC YAVAAVKAGS GFNINELKGK 120
  121 SSCHSCYQRS GGWNTPIGKL IATNKITWEG PNEMPVERAV SEFFSSSCVP GVSKPKYPNL 180
  181 CKACQGDCSC SHNEKYFGDD GAFQCLKNDN GQVAFVCHHA IPESERQNYE LLCMDGSRKS 240
  241 VEDYKTCNFA REPARTVIAR TDTDLQYVYD VLKQIPASDL FSSQAFGGKD LIFSDSATEL 300
  301 MLLPKRTDSL LYLKEEYYEA MQAFKDGNPS APTSQTKLAM CTIGHAEKNK CDSLDHVKKS 360
  361 CILEASVDDC IEKIKRKEAD FLAVDGGQVY IAGKCGLVPV MAEQSNSQSC SSGSGGTASY 420
  421 YAVAVVRKGS GLTWNNLEGK KSCHTGLGRS AGWKIPESAI CGEKDKCTLD KFFSEGCAPG 480
  481 ADPTSNMCKL CKGSGKAVGD ESKCKPSAEE QYYGYDGAFK FRCLAEKAGD VAFIKHTVVG 540
  541 DYTDGKGKDW AKDLKSEDFE LICPNTPDTT MKYTDFEKCN LAQVPVHAVI TREDARSAVV 600
  601 SFLSDIQSKN NDLFTSKDGK NLLFTDGTKC LQEIKGSVDD FLTKKYIDMI ERTYKTSQNV 660
  661 PDLVKACTFG NCISS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle