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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51476292
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGPRRLCC TGGGEGTPGA SGKRGPAATT SLVLCIPSVP PPVPFPTLWP PPSWRRQPPG  60
   61 GIRRDFSRRL RREANLVATC LPVRASLPHR LNMLRGPGPG LLLLAVLCLG TAVPSTGASK 120
  121 SKRQAQQMVQ PQSPVAVSQS KPGCYDNGKH YQINQQWERT YLGNALVCTC YGGSRGFNCE 180
  181 SKPEAEETCF DKYTGNTYRV GDTYERPKDS MIWDCTCVGA GRGRISCTIA NRCHEGGQSY 240
  241 KIGDTWRRPH ETGGYMLECV CLGNGKGEWT CKPIAEKCFD HAAGTSYVVG ETWEKPYQGW 300
  301 MMVDCTCLGE GSGRITCTSR NRCNDQDTRT SYRIGDTWSK KDNRGNLLQC ICTGNGRGEW 360
  361 KCERHTSVQT TSSGSGPFTD VRAAVYQPQP HPQPPPYGHC VTDSGVVYSV GMQWLKTQGN 420
  421 KQMLCTCLGN GVSCQETAVT QTYGGNSNGE PCVLPFTYNG RTFYSCATEG RQDGHLWCST 480
  481 TSNYEQDQKY SFCTDHTVLV QTRGGNSNGA LCHFPFLYNN HNYTDCTSEG RRDNMKWCGT 540
  541 TQNYDADQKF GFCPMAAHEE ICTTNEGVMY RIGDQWDKQH DMGHMMRCTC VGNGRGEWTC 600
  601 IAYSQLRDQC IVDDITYNVN DTFHKRHEEG HMLNCTCFGQ GRGRWKCDPV DQCQDSETGT 660
  661 FYQIGDSWEK YVHGVRYQCY CYGRGIGEWH CQPLQTYPSS SGPVEVFITE TPSQPNSHPI 720
  721 QWNAPQPSHI SKYILRWRPK NSVGRWKEAT IPGHLNSYTI KGLKPGVVYE GQLISIQQYG 780
  781 HQEVTRFDFT TTSTSTPVTS NTVTGETTPF SPLVATSESV TEITASSFVV SWVSASDTVS 840
  841 GFRVEYELSE EGDEPQYLDL PSTATSVNIP DLLPGRKYIV NVYQISEDGE QSLILSTSQT 900
  901 TAPDAPPDPT VDQVDDTSIV VRWSRPQAPI TGYRIVYSPS VEGSSTELNL PETANSVTLS 960
  961 DLQPGVQYNI TIYAVEENQE STPVVIQQET TGTPRSDTVP SPRDLQFVEV TDVKVTIMWT1020
 1021 PPESAVTGYR VDVIPVNLPG EHGQRLPISR NTFAEVTGLS PGVTYYFKVF AVSHGRESKP1080
 1081 LTAQQTTKLD APTNLQFVNE TDSTVLVRWT PPRAQITGYR LAVGLTRRGQ PRQYNVGPSV1140
 1141 SKYPLRNLQP ASEYTVSLVA IKGNQESPKA TGVFTTLQPG SSIPPYNTEV TETTIVITWT1200
 1201 PAPRIGFKLG VRPSQGGEAP REVTSGSGSI VVSGLTPGVE YVYIIQVLRD GQERDAPIVN1260
 1261 KVVTPLSPPT NLHLEANPDT GVLTVSWERS TTPDITGYRI TTTPTNGQQG NSLEEVVHAD1320
 1321 QSSCTFDNLS PGLEYNVSVY TVKDDKESVP ISDTIIPAVP PPTDLRFTNI GPDTMRVTWA1380
 1381 PPPSIDLTNF LVRYSPVKNE EDVAELSISP SDNAVVLTNL LPGTEYVVSV SSVYEQHEST1440
 1441 PLRGRQKTGL DSPTGIDFSD ITANSFTVHW IAPRATITGY RIRHHPEHFS GRPREDRVPH1500
 1501 SRNSITLTNL TPGTEYVVSI VALNGREESP LLIGQQSTVS DVPRDLEVVA ATPTSLLISW1560
 1561 DAPAVTVRYY RITYGETGGN SPVQEFTVPG SKSTATISGL KPGVDYTITV YAVTGRGDSP1620
 1621 ASSKPISINY RTEIDKPSQM QVTDVQDNSI SVKWLPSSSP VTGYRVTTTP KNGPGPTKTK1680
 1681 TAGPDQTEMT IEGLQPTVEY VVSVYAQNPS GESQPLVQTA VTTIPAPTDL KFTQVTPTSL1740
 1741 SAQWTPPNVQ LTGYRVWVTP KEKTGPMKEI NLAPDSSSVV VSGLMVATKY EVSVYALKDT1800
 1801 LTSRPAQGVV TTLENVSPPR RARVTDATET TITISWRTKT ETITGFQVDA VPANGQTPIQ1860
 1861 RTIKPDVRSY TITGLQPGTD YKIYLYTLND NARSSPVVID ASTAIDAPSN LRFLATTPNS1920
 1921 LLVSWQPPRA RITGYIIKYE KPGSPPREVV PRPRPGVTEA TITGLEPGTE YTIYVIALKN1980
 1981 NQKSEPLIGR KKTDELPQLV TLPHPNLHGP EILDVPSTVQ KTPFVTHPGY DTGNGIQLPG2040
 2041 TSGQQPSVGQ QMIFEEHGFR RTTPPTTATP IRHRPRPYPP NVGQEALSQT TISWAPFQDT2100
 2101 SEYIISCHPV GTDEEPLQFR VPGTSTSATL TGLTRGATYN IIVEALKDQQ RHKVREEVVT2160
 2161 VGNSVNEGLN QPTDDSCFDP YTVSHYAVGD EWERMSESGF KLLCQCLGFG SGHFRCDSSR2220
 2221 WCHDNGVNYK IGEKWDRQGE NGQMMSCTCL GNGKGEFKCD PHEATCYDDG KTYHVGEQWQ2280
 2281 KEYLGAICSC TCFGGQRGWR CDNCRRPGGE PSPEGTTGQS YNQYSQRYHQ RTNTNVNCPI2340
 2341 ECFMPLDVQA DREDSRE

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